STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_2847PFAM: Rieske [2Fe-2S] domain protein; KEGG: mca:MCA0225 Rieske 2Fe-2S family protein. (120 aa)    
Predicted Functional Partners:
Bind_1969
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: mfa:Mfla_0317 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.943
Bind_1765
PFAM: Rieske [2Fe-2S] domain protein; KEGG: xau:Xaut_3342 Rieske (2Fe-2S) domain protein.
  
  
 
0.912
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.906
Bind_2261
PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: oan:Oant_0190 sulfite reductase (ferredoxin).
     
 0.902
Bind_1219
PFAM: Rhodanese domain protein; KEGG: xau:Xaut_4678 rhodanese domain protein.
    
  0.900
Bind_1854
PFAM: Luciferase-like monooxygenase; KEGG: atc:AGR_L_2763 hypothetical protein.
   
 
  0.900
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
   
 
  0.900
Bind_2624
PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_4260 luciferase family protein.
   
 
  0.900
Bind_2692
PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_2509 alkanesulfonate monooxygenase.
   
 
  0.900
Bind_2401
KEGG: bra:BRADO5430 hypothetical protein.
  
     0.765
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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