STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_2861PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bja:bll5782 ABC transporter sugar-binding protein. (309 aa)    
Predicted Functional Partners:
Bind_2863
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpd:BURPS668_A0286 ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein.
 
 0.982
Bind_2862
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: pin:Ping_2807 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
Bind_2822
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: smd:Smed_4266 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.892
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.786
Bind_3235
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4428 PAS sensor protein.
   
 
 0.749
Bind_3073
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3209 sugar ABC transporter ATP-binding protein.
 
 
 0.632
Bind_2482
PFAM: PfkB domain protein; KEGG: oan:Oant_0289 PfkB domain protein.
 
  
 0.546
Bind_2860
PFAM: Carbohydrate-selective porin OprB; KEGG: psb:Psyr_1117 carbohydrate-selective porin OprB.
       0.520
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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