STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_2872PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bbt:BBta_2068 2-dehydro-3-deoxygalactonokinase. (324 aa)    
Predicted Functional Partners:
Bind_2871
PFAM: KDPG and KHG aldolase; KEGG: rsh:Rsph17029_3615 KDPG and KHG aldolase.
 
  
 0.994
Bind_2875
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: azc:AZC_3752 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.711
Bind_2873
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: jan:Jann_3839 transcriptional regulator, IclR family.
 
   
 0.679
Bind_3075
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bbt:BBta_2136 putative gluconolactonase.
 
   
 0.650
Bind_3077
Galactose 1-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:blr3205 dehydrogenase.
 
     0.597
Bind_2876
PFAM: PfkB domain protein; KEGG: bra:BRADO1805 ketodeoxygluconokinase.
 
     0.473
Bind_2459
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: atc:AGR_L_830 mannitol 2-dehydrogenase (MDH).
  
     0.457
Bind_2870
KEGG: pnu:Pnuc_1366 hypothetical protein.
       0.439
Bind_3081
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: xau:Xaut_1022 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.434
Bind_2821
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: azc:AZC_2643 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.414
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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