Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2943PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bbt:BBta_3743 putative glycerophosphoryl diester phosphodiesterase. (316 aa)    
Predicted Functional Partners:
Bind_3641
Lysophospholipase; PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_2819 alpha/beta hydrolase fold.
    
 0.906
Bind_0065
PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rme:Rmet_5902 ethanolamine ammonia lyase large subunit.
     
  0.900
Bind_0066
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: sma:SAV4545 ethanolamine ammonia-lyase small subunit; Belongs to the EutC family.
     
  0.900
Bind_2942
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5221 transcriptional regulator, AraC family.
 
     0.617
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.547
Bind_1439
KEGG: bra:BRADO6401 hypothetical protein.
  
     0.493
aqpZ
MIP family channel protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
 
 0.483
Bind_2973
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: sal:Sala_2525 transcriptional regulator, LuxR family.
  
     0.420
Bind_0379
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: tma:TM1429 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.414
Bind_3485
PFAM: major intrinsic protein; KEGG: gdi:GDI0872 putative aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.414
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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