Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2968PFAM: extracellular solute-binding protein family 1; KEGG: azo:azo3835 putative regulatory lipoprotein. (445 aa)    
Predicted Functional Partners:
Bind_2969
PFAM: protein of unknown function DUF1111; KEGG: pen:PSEEN2346 hypothetical protein.
 
    0.871
Bind_2520
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_0959 iron (III) ABC transporter, permease.
 
  
 0.860
Bind_2970
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA0153 possible outer membrane receptor for Fe transport.
 
  
 0.829
Bind_0644
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein; KEGG: aba:Acid345_4695 nuclease-related protein.
  
     0.577
Bind_0592
KEGG: ana:alr0587 unknown protein.
  
     0.524
Bind_2971
Transposase and inactivated derivatives-like protein; KEGG: bcs:BCAN_A0546 hypothetical protein.
       0.490
Bind_3675
KEGG: xau:Xaut_4721 hypothetical protein.
  
     0.475
Bind_2854
TIGRFAM: TonB family protein; KEGG: rru:Rru_A2153 TonB-like.
 
    0.462
Bind_0593
Permease-like protein; KEGG: mag:amb3714 predicted permease.
  
     0.460
Bind_0369
PFAM: TonB-dependent receptor; KEGG: azo:azo3844 putative TonB-dependent receptor.
  
  
 0.445
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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