Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3024PFAM: protein of unknown function DUF983; KEGG: pla:Plav_2829 protein of unknown function DUF983. (149 aa)    
Predicted Functional Partners:
Bind_3025
PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4418 major facilitator superfamily MFS_1.
 
     0.592
Bind_3107
KEGG: bja:bll0688 hypothetical protein.
  
     0.572
Bind_0667
PFAM: conserved hypothetical protein; KEGG: mex:Mext_1983 hypothetical protein; Belongs to the UPF0262 family.
 
   
 0.530
Bind_0068
PFAM: protein of unknown function DUF1052; KEGG: rpa:RPA0570 hypothetical protein.
  
   
 0.527
Bind_3530
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: azc:AZC_4070 periplasmic sensor signal transduction histidine kinase.
  
     0.517
atpF1
H+transporting two-sector ATPase B/B' subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   
 0.512
rpmG
PFAM: ribosomal protein L33; KEGG: mlo:msr0848 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.446
atpF2
H+transporting two-sector ATPase B/B' subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity).
  
   
 0.424
Bind_3023
KEGG: azc:AZC_1536 hypothetical protein.
       0.420
ctaG
Cytochrome c oxidase assembly protein CtaG/Cox11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
     0.418
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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