STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_3073PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3209 sugar ABC transporter ATP-binding protein. (511 aa)    
Predicted Functional Partners:
Bind_3072
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bra:BRADO1819 putative L-arabinose transport system permease protein AraH.
 
 0.995
Bind_3074
KEGG: bbt:BBta_2137 multiple sugar-binding periplasmic receptor ChvE precursor.
 
 0.993
Bind_3083
KEGG: bja:blr3200 ABC transporter sugar-binding protein.
  
 0.949
Bind_2822
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: smd:Smed_4266 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.941
Bind_3071
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bra:BRADO1392 ABC transporter; periplasmic subunit, putative sugar-binding protein.
 
 
 0.789
Bind_2862
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: pin:Ping_2807 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
 0.783
Bind_2824
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20712 putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor.
 
 
 0.663
Bind_2340
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_II0209 ribose ABC transporter, periplasmic ribose-binding protein.
 
 
 0.653
Bind_2837
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bra:BRADO1392 ABC transporter; periplasmic subunit, putative sugar-binding protein.
 
 
 0.636
Bind_2861
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bja:bll5782 ABC transporter sugar-binding protein.
 
 
 0.632
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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