STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_3075PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bbt:BBta_2136 putative gluconolactonase. (310 aa)    
Predicted Functional Partners:
Bind_3077
Galactose 1-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:blr3205 dehydrogenase.
 
  
 0.893
Bind_3076
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
   
 0.835
Bind_3078
PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RS05368 probable ketoglutarate semialdehyde dehydrogenase protein.
 
  
 0.734
Bind_3079
PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4924 major facilitator superfamily MFS_1.
       0.668
Bind_2872
PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bbt:BBta_2068 2-dehydro-3-deoxygalactonokinase.
 
   
 0.650
Bind_3082
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bra:BRADO1811 putative transcriptional regulatory protein, GntR family.
 
     0.650
Bind_3074
KEGG: bbt:BBta_2137 multiple sugar-binding periplasmic receptor ChvE precursor.
 
     0.616
Bind_3081
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: xau:Xaut_1022 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
     0.609
Bind_3080
PFAM: dihydrodipicolinate synthetase; KEGG: xau:Xaut_1021 dihydrodipicolinate synthetase; Belongs to the DapA family.
 
     0.601
Bind_3202
Gluconate 2-dehydrogenase (acceptor); PFAM: glucose-methanol-choline oxidoreductase; KEGG: bbt:BBta_1705 putative oxidoreductase, GMC family.
  
 
 0.534
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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