Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3088PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_0213 TonB dependent receptor, putative. (835 aa)    
Predicted Functional Partners:
Bind_2031
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pst:PSPTO_2607 TonB-dependent siderophore receptor, putative.
  
  
 0.696
Bind_3087
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: swi:Swit_2508 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein.
       0.605
Bind_2327
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gvi:glr0349 ferrichrome-iron receptor.
  
  
 0.600
Bind_0859
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_0746 TonB-dependent siderophore receptor.
  
  
 0.589
Bind_0238
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpe:RPE_4578 TonB-dependent siderophore receptor.
  
  
 0.588
Bind_0366
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX2077 ferric siderophore receptor.
  
  
 0.563
Bind_3086
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: fre:Franean1_2520 taurine dioxygenase.
  
    0.556
Bind_0237
PFAM: PepSY-associated TM helix domain protein; KEGG: nha:Nham_0971 hypothetical protein.
 
   
 0.508
Bind_1183
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX2077 ferric siderophore receptor.
  
  
 0.483
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.462
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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