Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
Bind_3147PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0845 GCN5-related N-acetyltransferase. (155 aa)    
Predicted Functional Partners:
Bind_3148
Hypothetical protein.
       0.776
Bind_3021
PFAM: transcription activator effector binding; KEGG: bra:BRADO0382 conserved hypothetical protein; putative secreted protein.
  
     0.761
Bind_3214
KEGG: rpb:RPB_3326 hypothetical protein.
  
     0.754
Bind_3675
KEGG: xau:Xaut_4721 hypothetical protein.
  
     0.751
Bind_0659
KEGG: xau:Xaut_2732 putative exported protein of unknown function.
  
     0.726
Bind_1008
KEGG: mex:Mext_2327 hypothetical protein.
  
     0.715
Bind_0306
PFAM: Chorismate mutase; KEGG: xau:Xaut_0395 chorismate mutase.
  
     0.699
Bind_1633
KEGG: mex:Mext_0926 hypothetical protein.
  
     0.684
Bind_3406
KEGG: mex:Mext_2511 hypothetical protein.
  
     0.663
Bind_0671
PFAM: NUDIX hydrolase; KEGG: bbt:BBta_6065 hypothetical protein.
  
     0.650
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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