Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3202Gluconate 2-dehydrogenase (acceptor); PFAM: glucose-methanol-choline oxidoreductase; KEGG: bbt:BBta_1705 putative oxidoreductase, GMC family. (522 aa)    
Predicted Functional Partners:
Bind_3203
KEGG: oan:Oant_0061 hypothetical protein.
 
     0.940
Bind_3369
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: cak:Caul_3607 gluconate 2-dehydrogenase (acceptor).
   
 
 0.824
Bind_3204
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_1387 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.796
Bind_3391
KEGG: azc:AZC_0964 hypothetical protein.
 
     0.795
Bind_0469
PFAM: Rhodanese domain protein; Ankyrin; KEGG: xau:Xaut_0147 rhodanese domain protein.
   
 0.715
Bind_2348
KEGG: rpa:RPA3958 hypothetical protein.
    
 0.700
Bind_3116
SMART: WD-40 repeat protein; KEGG: mex:Mext_2336 WD-40 repeat protein.
    
 0.700
Bind_2266
KEGG: ana:all2748 hypothetical protein.
    
 0.691
Bind_3069
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bja:blr6437 gluconolactonase precursor.
  
 
 0.574
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.557
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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