Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3205PFAM: cytochrome c class I; KEGG: azc:AZC_0960 cytochrome c. (143 aa)    
Predicted Functional Partners:
Bind_3369
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: cak:Caul_3607 gluconate 2-dehydrogenase (acceptor).
   
 
 0.963
Bind_0154
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.960
Bind_0155
Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.940
Bind_0156
PFAM: cytochrome c1; KEGG: rpd:RPD_1303 cytochrome c1.
 
 0.923
Bind_3357
PFAM: cytochrome c class I; KEGG: mex:Mext_0341 cytochrome c class I.
  
  
 
0.922
Bind_0011
PFAM: cytochrome c class I; KEGG: nwi:Nwi_2582 cytochrome c, class I.
  
  
 
0.918
Bind_0725
PFAM: cytochrome c oxidase subunit III; KEGG: rpd:RPD_0819 cytochrome c oxidase, subunit III.
  
 0.816
Bind_3204
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_1387 glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.791
Bind_0730
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.741
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.670
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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