Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bind_3284PFAM: Extracellular ligand-binding receptor; KEGG: nha:Nham_0148 extracellular ligand-binding receptor. (425 aa)    
Predicted Functional Partners:
Bind_0978
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: azc:AZC_4104 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.787
Bind_0977
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: azc:AZC_4105 putative branched-chain amino acid transport system permease protein.
  
  
 0.745
Bind_1968
PFAM: response regulator receiver; ANTAR domain protein; KEGG: pat:Patl_2529 response regulator receiver and ANTAR domain protein.
  
 
 0.652
Bind_0148
KEGG: bbt:BBta_1138 hypothetical protein.
  
     0.611
Bind_0980
KEGG: azc:AZC_4102 putative ABC transporter ATP-binding component; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.585
ureB
Urease, gamma subunit; KEGG: azc:AZC_1764 urease beta subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit; PFAM: Urease beta subunit; Urease gamma subunit region; Belongs to the urease beta subunit family.
     
 0.525
Bind_1411
PFAM: ComEC/Rec2-related protein; KEGG: mex:Mext_4682 ComEC/Rec2-related protein.
  
    0.510
Bind_0727
KEGG: xau:Xaut_4645 conserved protein CoxF.
  
     0.505
Bind_3484
KEGG: azc:AZC_0753 hypothetical protein.
  
     0.490
Bind_3031
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin).
     
 0.458
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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