Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pqqCCoenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. (254 aa)    
Predicted Functional Partners:
pqqB
Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
  
 0.997
pqqE
Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.971
Bind_3320
PFAM: coenzyme PQQ synthesis D; KEGG: rpa:RPA1949 pyrroloquinoline quinone biosynthesis protein D.
 
  
 0.952
Bind_3639
TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: acr:Acry_1741 pyrrolo-quinoline quinone.
 
  
 0.803
Bind_1201
PFAM: Pyrrolo-quinoline quinone; KEGG: dge:Dgeo_1149 pyrrolo-quinoline quinone.
 
  
 0.782
Bind_0969
PFAM: Pyrrolo-quinoline quinone; KEGG: dge:Dgeo_1149 pyrrolo-quinoline quinone.
 
  
 0.778
Bind_0010
PFAM: ABC-2 type transporter; KEGG: bja:blr6191 ABC transporter permease protein.
 
     0.733
Bind_0851
KEGG: bja:bll4707 hypothetical protein.
  
     0.666
Bind_0009
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr6190 ABC transporter ATP-binding protein.
  
     0.616
Bind_0145
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: noc:Noc_1156 peptidase S9, prolyl oligopeptidase active site region.
  
    0.540
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.