Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Bind_3445KEGG: swi:Swit_3661 hypothetical protein. (163 aa)    
Predicted Functional Partners:
Bind_0842
KEGG: ava:Ava_1124 hypothetical protein.
  
     0.682
Bind_0502
KEGG: rca:Rcas_3511 hypothetical protein.
  
     0.659
Bind_2327
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gvi:glr0349 ferrichrome-iron receptor.
  
     0.610
Bind_0311
PFAM: Ion transport 2 domain protein; K channel inward rectifier conserved region 2 domain protein; KEGG: gdi:GDI2414 putative inward rectifier potassium channel.
  
     0.570
Bind_0447
PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_2255 glycosyltransferases probably involved in cell wall biogenesis-like.
  
     0.548
Bind_0374
KEGG: mes:Meso_2586 hypothetical protein.
  
     0.518
Bind_0838
PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A2618 glycosyl transferase, group 2 family protein.
  
     0.513
Bind_0136
PFAM: glycosyl transferase family 2; KEGG: ter:Tery_4588 glycosyl transferase, family 2.
  
     0.488
Bind_2993
KEGG: mma:MM_0228 hypothetical protein.
  
     0.488
Bind_0288
PFAM: manganese containing catalase; KEGG: ava:Ava_3821 manganese containing catalase.
  
     0.482
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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