Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3462PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_4272 extracellular solute-binding protein family 5. (552 aa)    
Predicted Functional Partners:
Bind_3463
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4273 binding-protein-dependent transport systems inner membrane component.
 
 0.997
Bind_3464
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4274 binding-protein-dependent transport systems inner membrane component.
 
 
 0.996
Bind_3465
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: csa:Csal_3002 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.987
Bind_2548
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2660 ABC transporter permease protein.
 
 
 0.887
Bind_2553
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: azc:AZC_2663 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.841
Bind_2552
KEGG: sme:SMa2081 probable ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.827
Bind_2549
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2661 ABC transporter permease protein.
 
  
 0.820
Bind_3461
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: oan:Oant_4151 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
    0.644
Bind_2546
PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_2772 probable oligopeptide binding protein AppA.
 
 
0.554
Bind_2547
PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_2585 putative ABC transporter, substrate binding subunit.
 
 
0.550
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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