STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_3465PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: csa:Csal_3002 ABC transporter related; Belongs to the ABC transporter superfamily. (548 aa)    
Predicted Functional Partners:
Bind_3464
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4274 binding-protein-dependent transport systems inner membrane component.
 
 0.998
Bind_3463
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4273 binding-protein-dependent transport systems inner membrane component.
 
 0.995
Bind_3462
PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_4272 extracellular solute-binding protein family 5.
 
 
 0.987
Bind_2549
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2661 ABC transporter permease protein.
  
 0.971
Bind_3359
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_7053 putative oligopeptide transport protein (ABC superfamily, membrane).
 
  
 0.830
Bind_3360
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_2515 binding-protein-dependent transport systems inner membrane component.
  
 0.830
Bind_2548
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2660 ABC transporter permease protein.
  
 0.821
Bind_2194
PFAM: extracellular solute-binding protein family 5; KEGG: bov:BOV_A0542 peptide ABC transporter, periplasmic peptide-binding protein.
 
  
 0.629
Bind_2546
PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_2772 probable oligopeptide binding protein AppA.
 
    0.609
Bind_3358
PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_0134 putative ABC transporter solute-binding protein precursor.
 
  
 0.575
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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