Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3473PFAM: copper resistance protein CopC; KEGG: bbt:BBta_p0115 copper resistance protein C. (122 aa)    
Predicted Functional Partners:
Bind_3474
PFAM: copper resistance D domain protein; KEGG: rpd:RPD_4272 copper resistance D.
 
  
 0.961
Bind_1335
PFAM: protein of unknown function DUF461; KEGG: xau:Xaut_0418 protein of unknown function DUF461.
  
  
 0.826
Bind_1939
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI1147 pyridine nucleotide-disulphide oxidoreductase.
  
 
   0.725
Bind_0237
PFAM: PepSY-associated TM helix domain protein; KEGG: nha:Nham_0971 hypothetical protein.
  
    0.697
Bind_2694
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Patatin; KEGG: xau:Xaut_4913 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
   0.659
Bind_3369
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: cak:Caul_3607 gluconate 2-dehydrogenase (acceptor).
   
 
 0.637
Bind_2679
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: spe:Spro_2413 heavy metal translocating P-type ATPase.
     
 0.560
Bind_3472
PFAM: metallophosphoesterase; KEGG: mex:Mext_2362 metallophosphoesterase.
       0.513
Bind_3475
KEGG: mex:Mext_1456 hypothetical protein.
       0.471
Bind_1836
KEGG: oan:Oant_3233 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.
     
 0.429
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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