Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3495KEGG: nha:Nham_2818 hypothetical protein. (328 aa)    
Predicted Functional Partners:
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
 
    0.955
Bind_3492
KEGG: nha:Nham_2821 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
 
    0.887
Bind_3493
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
     0.816
Bind_0279
TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: rpd:RPD_1188 ModD protein; Belongs to the NadC/ModD family.
 
    0.628
Bind_3496
PFAM: protein of unknown function UPF0102; KEGG: mex:Mext_0406 protein of unknown function UPF0102; Belongs to the UPF0102 family.
       0.488
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.465
Bind_1032
Mannose-6-phosphate isomerase; PFAM: N-acylglucosamine 2-epimerase; KEGG: xau:Xaut_3549 mannose-6-phosphate isomerase.
  
     0.450
Bind_2108
KEGG: mex:Mext_1623 glycosyl transferase group 1.
  
     0.400
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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