STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_3575PFAM: amine oxidase; KEGG: mca:MCA2837 amine oxidase family, flavin-containing protein. (529 aa)    
Predicted Functional Partners:
Bind_1664
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nha:Nham_0613 amine oxidase.
  
  
  0.911
Bind_1794
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: dps:DP2330 similar to indole-3-pyruvate decarboxylase.
  
 
 0.906
Bind_0041
PFAM: Aldehyde Dehydrogenase_; KEGG: cak:Caul_4341 aldehyde dehydrogenase_; Belongs to the aldehyde dehydrogenase family.
     
 0.901
Bind_0774
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI2473 alcohol dehydrogenase.
    
  0.900
Bind_0909
TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0902 alcohol dehydrogenase.
    
  0.900
Bind_1769
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_4367 amine oxidase.
     
  0.900
Bind_2495
TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gvi:glr4425 glutathione dependent formaldehyde dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
  0.900
Bind_2506
PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B3049 chaperone protein HchA.
  
  
  0.831
Bind_0854
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hha:Hhal_0152 glyoxalase/bleomycin resistance protein/dioxygenase.
     
  0.800
Bind_3204
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_1387 glyoxalase/bleomycin resistance protein/dioxygenase.
     
  0.800
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.