Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3576PFAM: Luciferase-like monooxygenase; KEGG: bra:BRADO3786 conserved hypothetical protein, putative luciferase-alpha subunit. (329 aa)    
Predicted Functional Partners:
Bind_3575
PFAM: amine oxidase; KEGG: mca:MCA2837 amine oxidase family, flavin-containing protein.
 
     0.574
Bind_3577
PFAM: dihydroneopterin aldolase; KEGG: gbe:GbCGDNIH1_0762 dihydroneopterin aldolase.
       0.550
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.446
Bind_0592
KEGG: ana:alr0587 unknown protein.
  
     0.442
Bind_0842
KEGG: ava:Ava_1124 hypothetical protein.
  
     0.429
Bind_3578
PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mex:Mext_1805 transcriptional coactivator/pterin dehydratase.
       0.415
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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