Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Bind_3578PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mex:Mext_1805 transcriptional coactivator/pterin dehydratase. (125 aa)    
Predicted Functional Partners:
Bind_3577
PFAM: dihydroneopterin aldolase; KEGG: gbe:GbCGDNIH1_0762 dihydroneopterin aldolase.
 
   
 0.827
tadA
CMP/dCMP deaminase zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
  
 0.732
Bind_3600
Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: har:HEAR2244 aromatic amino acid aminotransferase.
  
  
 0.538
Bind_0851
KEGG: bja:bll4707 hypothetical protein.
  
     0.477
Bind_1792
PFAM: Endoribonuclease L-PSP; KEGG: mex:Mext_4070 endoribonuclease L-PSP.
  
    0.428
Bind_3576
PFAM: Luciferase-like monooxygenase; KEGG: bra:BRADO3786 conserved hypothetical protein, putative luciferase-alpha subunit.
       0.415
Bind_2577
KEGG: bxe:Bxe_A1720 hypothetical protein.
  
  
 0.410
Bind_2578
KEGG: bxe:Bxe_A1719 hypothetical protein.
  
  
 0.410
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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