STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_3585KEGG: bja:bll6847 hypothetical protein. (149 aa)    
Predicted Functional Partners:
Bind_3586
KEGG: mex:Mext_0694 hypothetical protein.
 
     0.954
Bind_3587
KEGG: ret:RHE_CH00689 hypothetical protein.
 
     0.925
Bind_3553
PFAM: flagellar FlbT family protein; KEGG: bja:bll6854 flagellar biosynthesis repressor FlbT.
 
   
 0.805
Bind_3554
PFAM: flagellar FlaF family protein; KEGG: mes:Meso_0276 flagellar FlaF.
 
     0.805
Bind_3555
Flagellar hook-associated 3 family protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
   
 0.804
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: bja:bll6857 flagellar hook-associated protein FlgK.
 
     0.795
Bind_2686
KEGG: mex:Mext_0632 putative chemotaxis protein precursor.
 
     0.777
Bind_3387
Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; KEGG: rle:RL0727 putative two-component regulator transcriptional regulatory protein.
 
     0.776
Bind_2684
PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc03045 hypothetical protein.
 
     0.775
Bind_2809
PFAM: protein of unknown function DUF1217; KEGG: bov:BOV_A0118 hypothetical protein.
 
     0.775
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.