Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_3587KEGG: ret:RHE_CH00689 hypothetical protein. (169 aa)    
Predicted Functional Partners:
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: bja:bll6857 flagellar hook-associated protein FlgK.
 
  
 0.986
Bind_3656
KEGG: bja:bll6876 flagellar basal body rod protein FlgB.
 
 
 0.986
Bind_3652
Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
 
  
 0.984
Bind_2689
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.982
Bind_3648
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.981
fliE
PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_0620 flagellar hook-basal body complex protein FliE.
 
  
 0.978
Bind_3557
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: rpc:RPC_1111 flagellar hook protein FlgE.
 
  
 0.972
Bind_2805
PFAM: flagellar motor switch protein FliM; KEGG: azc:AZC_0643 flagellar motor switch protein.
 
 
 0.966
Bind_3552
PFAM: flagellar hook capping protein; KEGG: azc:AZC_0652 flagellar hook assembly scaffolding protein.
 
  
 0.961
Bind_2807
PFAM: flagellar motor switch protein FliG; KEGG: azc:AZC_0640 flagellar motor switch protein.
 
  
 0.958
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.