Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3646PFAM: short chain fatty acid transporter; KEGG: reu:Reut_B5759 short chain fatty acid transporter. (478 aa)    
Predicted Functional Partners:
Bind_0564
PFAM: Citrate transporter; KEGG: rso:RSc2518 hypothetical protein.
 
   
 0.567
Bind_1401
KEGG: mex:Mext_4756 fusaric acid resistance protein conserved region.
  
     0.471
Bind_3274
3-oxoacid CoA-transferase, B subunit; KEGG: rru:Rru_A1382 butyrate-acetoacetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
 
  
 0.449
Bind_1141
KEGG: nha:Nham_1247 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
 
  
 0.434
Bind_1446
KEGG: pde:Pden_1711 hypothetical protein.
  
     0.419
Bind_3645
TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: pap:PSPA7_4208 probable transglycolase.
       0.411
Bind_1395
PFAM: Citrate transporter; KEGG: azc:AZC_1305 putative H+/gluconate symporter.
 
   
 0.408
Bind_3273
KEGG: rru:Rru_A1383 acetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase.
 
  
 0.408
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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