Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bind_3671PFAM: protein of unknown function DUF330; KEGG: mex:Mext_0894 protein of unknown function DUF330. (198 aa)    
Predicted Functional Partners:
Bind_3670
PFAM: Mammalian cell entry related domain protein; KEGG: mex:Mext_0893 mammalian cell entry related domain protein.
 
   0.976
Bind_3669
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0892 ABC transporter related.
 
    0.863
Bind_3668
PFAM: protein of unknown function DUF140; KEGG: mex:Mext_0891 protein of unknown function DUF140.
 
  
 0.817
Bind_3499
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_2214 ATP-binding component of ABC transporter.
 
    0.793
Bind_3500
PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1921 protein of unknown function DUF140.
 
  
 0.713
Bind_0571
PFAM: protein of unknown function DUF1239; KEGG: bbt:BBta_0124 hypothetical protein.
  
     0.518
Bind_1070
KEGG: rpd:RPD_0792 hypothetical protein.
  
     0.508
Bind_1574
PFAM: MltA-interacting MipA family protein; KEGG: xau:Xaut_1031 MltA-interacting MipA family protein.
  
     0.493
Bind_3648
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.493
Bind_0130
SMART: ribosomal RNA adenine methylase transferase; KEGG: azc:AZC_0161 phospholipid N-methyltransferase.
  
     0.471
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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