Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_3672TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpd:RPD_0482 cation diffusion facilitator family transporter. (329 aa)    
Predicted Functional Partners:
Bind_2679
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: spe:Spro_2413 heavy metal translocating P-type ATPase.
  
  
 0.638
Bind_3673
KEGG: mex:Mext_0714 ceramide glucosyltransferase.
       0.578
Bind_2691
PFAM: Rhodanese domain protein; KEGG: bja:bll7966 putative thiosulfate sulfurtransferase.
     
 0.484
Bind_0853
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpd:RPD_2019 cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 
0.477
Bind_1836
KEGG: oan:Oant_3233 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.
 
  
 0.473
Bind_1278
Transcriptional regulator, ArsR family; PFAM: Rhodanese domain protein; regulatory protein ArsR; KEGG: bps:BPSS2118 ArsR family transcriptional regulator.
     
 0.465
Bind_1848
KEGG: bbt:BBta_4836 hypothetical protein.
  
    0.461
Bind_1906
KEGG: amr:AM1_B0141 hypothetical protein.
  
    0.461
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
    0.455
Bind_1958
KEGG: scl:sce7776 two-component hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
     
 0.426
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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