Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (88 aa)    
Predicted Functional Partners:
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.999
Msil_0022
PFAM: type III secretion exporter; KEGG: rpc:RPC_1093 flagellar biosynthesis protein FlhB.
 
 
 0.998
Msil_0025
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bid:Bind_3655 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.998
Msil_0042
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bid:Bind_3557 flagellar basal body FlaE domain protein.
 
 
 0.998
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.997
Msil_0035
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.997
Msil_0047
PFAM: flagellar hook capping protein; KEGG: bid:Bind_3552 flagellar hook capping protein.
 
 
 0.997
Msil_0050
PFAM: type III secretion system inner membrane R protein; KEGG: bid:Bind_3589 flagellar biosynthesis protein FliR.
 
 
 0.997
Msil_0021
PFAM: flagellar motor switch protein FliG; KEGG: bid:Bind_2807 flagellar motor switch protein FliG.
 
 
 0.995
Msil_0024
KEGG: bid:Bind_3656 flagellar basal body rod protein FlgB.
 
 
 0.994
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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