Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Msil_0136PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_1489 GCN5-related N-acetyltransferase. (167 aa)    
Predicted Functional Partners:
cysS
KEGG: bid:Bind_1915 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.803
Msil_0137
TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bid:Bind_1913 2-isopropylmalate synthase/homocitrate synthase family protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.773
Msil_2862
KEGG: bid:Bind_1008 hypothetical protein.
  
     0.683
Msil_1669
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bid:Bind_1638 peptidoglycan-binding domain 1 protein.
  
     0.650
Msil_1851
PFAM: transcription activator effector binding; KEGG: bid:Bind_3021 transcription activator effector binding.
  
     0.638
Msil_1388
KEGG: bid:Bind_3214 hypothetical protein.
  
     0.623
Msil_3235
PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0845 GCN5-related N-acetyltransferase.
  
     0.603
Msil_0900
KEGG: bid:Bind_2305 hypothetical protein.
  
     0.595
Msil_0132
KEGG: bid:Bind_3675 hypothetical protein.
  
     0.543
Msil_3300
PFAM: AsmA family protein; KEGG: bid:Bind_3365 AsmA family protein.
  
     0.479
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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