Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Msil_0195KEGG: bja:bll4707 hypothetical protein. (183 aa)    
Predicted Functional Partners:
Msil_0196
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: xau:Xaut_0031 YVTN beta-propeller repeat-containing protein.
 
     0.905
Msil_1588
KEGG: bbt:BBta_5954 hypothetical protein.
 
   
 0.831
Msil_1585
PFAM: extracellular solute-binding protein family 3; KEGG: bja:bll6195 putative methanol oxidation protein.
  
     0.766
Msil_1586
KEGG: bja:blr6214 putative cytochrome c protein.
  
     0.763
Msil_3270
KEGG: mrd:Mrad2831_3517 hypothetical protein.
  
     0.757
Msil_3185
KEGG: mpo:Mpop_1736 sulphur oxidation protein SoxZ.
 
     0.756
Msil_1584
KEGG: bja:blr6192 hypothetical protein.
 
     0.746
Msil_3386
SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_0098 extracellular solute-binding protein family 3.
  
     0.736
Msil_0472
SMART: extracellular solute-binding protein family 3; KEGG: mrd:Mrad2831_4209 extracellular solute-binding protein family 3.
  
     0.735
Msil_1247
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: bid:Bind_0846 amino acid adenylation domain protein.
  
 
 0.735
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.