Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Msil_0200HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (257 aa)    
Predicted Functional Partners:
Msil_3920
KEGG: bid:Bind_3013 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20.
 
 
 0.998
Msil_3921
KEGG: bid:Bind_3014 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
 0.975
Msil_0661
PFAM: aminoglycoside phosphotransferase; KEGG: azc:AZC_1165 putative kinase.
   
    0.924
Msil_0199
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bid:Bind_0854 glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.783
Msil_0159
RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.749
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.645
Msil_0211
KEGG: mgm:Mmc1_1514 glycogen debranching enzyme GlgX; TIGRFAM: 4-alpha-glucanotransferase; glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 77; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
   
 0.551
Msil_1492
KEGG: bja:bll8142 hypothetical protein.
   
    0.543
Msil_1675
KEGG: bid:Bind_1645 hypothetical protein.
   
    0.543
Msil_1843
KEGG: atc:AGR_L_1520 hypothetical protein.
   
    0.543
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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