Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Msil_0205PFAM: aldo/keto reductase; KEGG: eli:ELI_09965 hypothetical protein. (268 aa)    
Predicted Functional Partners:
Msil_0204
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: eli:ELI_09960 oxidoreductase, putative.
 
     0.802
Msil_0618
PFAM: ROK family protein; KEGG: pla:Plav_2811 ROK family protein.
     
  0.800
Msil_0687
KEGG: bra:BRADO2202 putative aldo/keto reductase.
  
     0.649
Msil_0203
KEGG: mmi:MMAR_1115 hypothetical protein.
       0.444
Msil_0764
PFAM: aldo/keto reductase; KEGG: dge:Dgeo_1685 aldo/keto reductase.
  
     0.432
Msil_3685
PFAM: aldo/keto reductase; KEGG: rru:Rru_A2876 aldo/keto reductase.
  
     0.418
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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