Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Msil_0232PFAM: glycosyl transferase group 1; KEGG: gox:GOX1607 lipopolysaccharide N-acetylglucosaminyltransferase II. (489 aa)    
Predicted Functional Partners:
Msil_0231
Hypothetical protein.
       0.556
Msil_2730
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mrd:Mrad2831_5580 ABC transporter related.
 
 
 0.523
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.495
Msil_0229
KEGG: mpo:Mpop_0840 conserved hypothetical protein; putative signal peptide.
       0.402
Msil_0230
KEGG: mpo:Mpop_0839 hypothetical protein.
       0.402
Msil_0939
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0594 ABC transporter related.
 
 
 0.401
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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