Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Msil_0480SMART: von Willebrand factor type A; KEGG: mpo:Mpop_4623 von Willebrand factor type A. (342 aa)    
Predicted Functional Partners:
Msil_0481
KEGG: mrd:Mrad2831_4200 MxaD protein, putative.
  
 0.997
Msil_0477
KEGG: mex:Mext_4144 MxaA protein, putative.
 
  
 0.996
Msil_0478
SMART: von Willebrand factor type A; KEGG: mrd:Mrad2831_4203 von Willebrand factor type A.
 
  
 0.996
Msil_0479
KEGG: mrd:Mrad2831_4202 hypothetical protein.
 
  
  0.995
Msil_0474
Methanol dehydrogenase beta subunit; Catalyzes the oxidation of primary alcohols including methanol.
 
  
  0.988
Msil_0473
Cytochrome c class I; Electron acceptor for MDH. Acts in methanol oxidation.
 
  
  0.986
Msil_0472
SMART: extracellular solute-binding protein family 3; KEGG: mrd:Mrad2831_4209 extracellular solute-binding protein family 3.
 
  
  0.983
Msil_0471
TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mex:Mext_4150 PQQ-dependent dehydrogenase, methanol/ethanol family.
 
  
  0.976
Msil_0476
KEGG: mex:Mext_4145 hypothetical protein.
 
    0.960
Msil_3386
SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_0098 extracellular solute-binding protein family 3.
 
  
  0.939
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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