Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Msil_0689PFAM: glycosyl transferase group 1; KEGG: bra:BRADO2218 putative glycosyl transferase. (397 aa)    
Predicted Functional Partners:
Msil_0688
KEGG: oan:Oant_3376 acetyltransferase, CysE/LacA/LpxA/NodL family.
 
  
 0.903
Msil_0094
PFAM: glycosyl transferase group 1; KEGG: bvi:Bcep1808_6510 glycosyl transferase.
  
     0.714
Msil_2612
PFAM: glycosyl transferase group 1; KEGG: amr:AM1_0384 glycosyl transferase, group 1 family protein.
  
     0.626
Msil_2610
PFAM: polysaccharide biosynthesis protein; KEGG: afw:Anae109_1814 polysaccharide biosynthesis protein.
 
  
 0.576
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.495
Msil_0687
KEGG: bra:BRADO2202 putative aldo/keto reductase.
       0.485
Msil_0362
Capsular exopolysaccharide family; KEGG: bid:Bind_1135 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.476
Msil_2378
KEGG: bja:blr3607 hypothetical protein.
  
     0.447
Msil_3537
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bid:Bind_1034 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.442
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.