Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tolQProtein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (248 aa)    
Predicted Functional Partners:
Msil_0922
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bid:Bind_0272 biopolymer transport protein ExbD/TolR.
 
 
 0.953
Msil_3136
TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bid:Bind_0527 protein TolR.
 
 
 0.910
Msil_0825
TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: azc:AZC_1259 TonB system transport protein.
 
 
 0.903
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
   
 0.863
Msil_0700
TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bid:Bind_1796 lipoprotein releasing system, transmembrane protein, LolC/E family.
 
   
 0.757
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.739
Msil_0824
TIGRFAM: TonB family protein; KEGG: bid:Bind_0233 TonB family protein.
  
 
 0.706
yidC
60 kDa inner membrane insertion protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
   
 0.684
Msil_2667
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bid:Bind_3062 biopolymer transport protein ExbD/TolR.
 
 
 0.668
Msil_0158
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0568 ABC transporter related.
 
   
 0.661
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.