Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Msil_1601PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cbd:CBUD_0821 glyoxalase family protein. (163 aa)    
Predicted Functional Partners:
Msil_2458
PFAM: YCII-related; KEGG: bmj:BMULJ_04986 hypothetical protein.
    0.760
Msil_1602
PFAM: protein of unknown function DUF721; KEGG: bid:Bind_0747 protein of unknown function DUF1159.
       0.625
Msil_1599
KEGG: bid:Bind_0749 hypothetical protein.
       0.512
Msil_1600
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.512
Msil_1603
PFAM: DSBA oxidoreductase; KEGG: bid:Bind_0746 DsbA oxidoreductase.
       0.405
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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