Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Msil_1802KEGG: reh:H16_B2414 hypothetical protein. (351 aa)    
Predicted Functional Partners:
Msil_1094
PFAM: protein of unknown function DUF239; KEGG: lbc:LACBIDRAFT_307948 hypothetical protein Pfam: DUF239.
  
     0.770
Msil_2550
SMART: Thaumatin pathogenesis-related protein; KEGG: osa:4352858 hypothetical protein.
  
     0.706
Msil_2768
Hypothetical protein; KEGG: rle:RL3945 putative phage DNA primase/helicase.
  
     0.647
Msil_0706
PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0927 acetyltransferase.
  
     0.575
Msil_1772
Nitroreductase; KEGG: mag:amb0269 nitroreductase.
  
     0.501
Msil_1801
KEGG: mrd:Mrad2831_3601 beta-lactamase domain protein.
       0.451
rppH
NUDIX hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
  
     0.434
Msil_1463
PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_3045 monooxygenase, FAD-binding.
  
     0.418
Msil_0085
PFAM: acylphosphatase; KEGG: rpb:RPB_2369 acylphosphatase.
  
     0.405
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.