STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msil_2091Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (332 aa)    
Predicted Functional Partners:
Msil_2465
PFAM: Catalase domain protein; KEGG: gbe:GbCGDNIH1_1969 catalase.
  
  
 
0.929
Msil_3597
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 
0.929
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
    
 0.912
Msil_1695
PFAM: FAD linked oxidase domain protein; KEGG: oan:Oant_3010 D-lactate dehydrogenase (cytochrome).
   
 0.911
Msil_2541
PFAM: FAD linked oxidase domain protein; KEGG: mlo:mlr6919 glycolate oxidase subunits GlcE.
   
 0.911
Msil_2540
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: oan:Oant_3012 protein of unknown function DUF224 cysteine-rich region domain protein.
     
  0.900
hfq
RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
    
 
 0.635
Msil_0971
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bid:Bind_2430 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
   
 
 0.590
Msil_2647
Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bra:BRADO3235 thioredoxin peroxidase (AhpC, alkyl hydroperoxide reductase).
   
 
 0.554
Msil_2977
PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rpe:RPE_3163 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
   
 0.468
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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