Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Msil_2812TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bid:Bind_0056 thioredoxin reductase. (326 aa)    
Predicted Functional Partners:
Msil_1411
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bid:Bind_2176 thioredoxin; Belongs to the thioredoxin family.
 
 0.988
Msil_2331
PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: aba:Acid345_1748 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
0.917
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.909
Msil_3550
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bid:Bind_2345 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.907
Msil_0488
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.906
Msil_3621
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.685
Msil_1865
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bid:Bind_2792 thioredoxin.
  
 
 0.680
Msil_0971
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bid:Bind_2430 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 
 0.664
Msil_2647
Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bra:BRADO3235 thioredoxin peroxidase (AhpC, alkyl hydroperoxide reductase).
  
 
 0.632
Msil_0411
KEGG: pfl:PFL_0214 hypothetical protein.
  
 
 0.625
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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