STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msil_3061KEGG: pan:PODANSg3174 hypothetical protein. (335 aa)    
Predicted Functional Partners:
Msil_3062
Hypothetical protein; KEGG: rme:Rmet_5029 lipolytic enzyme, G-D-S-L.
       0.773
Msil_3060
KEGG: bid:Bind_2132 hypothetical protein.
       0.737
Msil_3059
KEGG: mes:Meso_2767 hypothetical protein.
  
  
 0.631
Msil_3056
PFAM: conserved hypothetical protein; KEGG: bid:Bind_2726 hypothetical protein.
       0.567
Msil_3057
KEGG: bid:Bind_2725 conserved hypothetical protein, putative phage associated protein.
  
    0.556
Msil_3063
PFAM: protein of unknown function DUF847; KEGG: bid:Bind_3374 protein of unknown function DUF847.
  
    0.550
Msil_3054
KEGG: bid:Bind_2728 hypothetical protein.
       0.540
Msil_3058
KEGG: bid:Bind_2724 conserved hypothetical protein, putative phage associated protein.
       0.540
Msil_3048
Hypothetical protein; KEGG: hsm:HSM_0669 phage virion morphogenesis protein.
  
    0.537
Msil_3053
KEGG: bid:Bind_0643 hypothetical protein.
       0.532
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.