Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Msil_3101PFAM: protein of unknown function DUF159; KEGG: mes:Meso_3812 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (197 aa)    
Predicted Functional Partners:
Msil_0095
PFAM: protein of unknown function DUF159; KEGG: bid:Bind_2022 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family.
  
     0.748
Msil_3100
PFAM: protein of unknown function DUF955.
       0.515
Msil_3102
KEGG: mlo:mlr8038 hypothetical protein.
       0.482
Msil_3098
PFAM: integrase family protein; KEGG: met:M446_6923 integrase family protein; Belongs to the 'phage' integrase family.
  
    0.424
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.