STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msil_3151Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mfa:Mfla_0814 signal transduction histidine kinase, glucose-6-phosphate specific. (453 aa)    
Predicted Functional Partners:
Msil_0484
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mrd:Mrad2831_3394 integral membrane sensor signal transduction histidine kinase.
  
  
 
0.925
Msil_3830
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bid:Bind_0302 integral membrane sensor signal transduction histidine kinase.
  
  
 
0.925
Msil_0485
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpo:Mpop_4619 two component transcriptional regulator, LuxR family.
 
 
 0.852
Msil_3829
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bid:Bind_0304 two component transcriptional regulator, LuxR family.
 
 
 0.851
Msil_2019
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rpb:RPB_4035 two component transcriptional regulator, LuxR family.
 
 
 0.850
Msil_3144
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mfa:Mfla_0816 two component LuxR family transcriptional regulator.
 
 
 0.850
Msil_2271
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bja:blr5281 two-component response regulator.
 
 
 0.848
Msil_2341
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: csa:Csal_0866 two component transcriptional regulator, LuxR family.
 
 
 0.804
Msil_3150
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bid:Bind_0305 TonB-dependent receptor.
       0.507
Msil_0661
PFAM: aminoglycoside phosphotransferase; KEGG: azc:AZC_1165 putative kinase.
   
    0.501
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.