STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msil_3180KEGG: fjo:Fjoh_2662 hypothetical protein. (362 aa)    
Predicted Functional Partners:
Msil_3181
KEGG: noc:Noc_1898 hypothetical protein.
 
    0.585
Msil_0971
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bid:Bind_2430 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
   
 
 0.527
Msil_2647
Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bra:BRADO3235 thioredoxin peroxidase (AhpC, alkyl hydroperoxide reductase).
   
 
 0.527
Msil_3209
PFAM: MaoC domain protein dehydratase; KEGG: azo:azo0191 hypothetical protein.
  
 0.520
Msil_2723
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: bid:Bind_1113 beta-ketoacyl synthase.
  
 0.510
Msil_2977
PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rpe:RPE_3163 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
   
 0.468
Msil_0200
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
  
 0.465
Msil_1221
PFAM: MaoC domain protein dehydratase; KEGG: bid:Bind_0287 MaoC domain protein dehydratase.
   
 0.457
Msil_3435
PFAM: MaoC domain protein dehydratase; KEGG: swi:Swit_0956 MaoC domain protein dehydratase.
   
 0.457
Msil_0549
KEGG: fal:FRAAL2167 conserved hypothetical protein; putative signal peptide.
  
    0.406
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.