Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Msil_3185KEGG: mpo:Mpop_1736 sulphur oxidation protein SoxZ. (276 aa)    
Predicted Functional Partners:
Msil_3184
Rhodanese; KEGG: mex:Mext_1774 rhodanese.
 
   
 0.961
Msil_1092
PFAM: cytochrome c class I; KEGG: xau:Xaut_2608 cytochrome c class I.
    
 0.944
Msil_0430
PFAM: Rhodanese domain protein; KEGG: bid:Bind_1219 rhodanese domain protein.
     
 0.915
cysD
TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bid:Bind_0071 sulfate adenylyltransferase, small subunit.
     
 0.910
cysN
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.910
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
     
 0.904
Msil_1078
Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
  0.900
Msil_1079
TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_2258 sulfate ABC transporter, inner membrane subunit CysW.
     
  0.900
Msil_2246
TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bid:Bind_1572 sulfate ABC transporter, periplasmic sulfate-binding protein.
     
 0.900
Msil_2847
TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bid:Bind_1690 sulfate ABC transporter, periplasmic sulfate-binding protein.
     
 0.900
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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