Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Msil_3560TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bid:Bind_3091 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (393 aa)    
Predicted Functional Partners:
Msil_3559
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bid:Bind_3092 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
 0.988
Msil_3307
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bid:Bind_2449 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
  
 0.964
Msil_0628
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rle:RL4275 Acr/RND family efflux transmembrane transporter.
  
 0.963
Msil_1454
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bbr:BB2528 acriflavine resistance protein B.
  
 0.962
Msil_1892
PFAM: acriflavin resistance protein; KEGG: rpb:RPB_0894 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.880
Msil_2444
PFAM: acriflavin resistance protein; KEGG: bja:bll0301 cation efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.867
Msil_2848
PFAM: acriflavin resistance protein; KEGG: bam:Bamb_2096 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.850
Msil_3414
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: acriflavin resistance protein; secretion protein HlyD family protein; KEGG: bam:Bamb_2096 acriflavin resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.848
Msil_2463
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bra:BRADO4411 AcrB/AcrD/AcrF family mulitdrug efflux protein.
  
 
 0.828
Msil_1453
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: bid:Bind_1725 type I secretion outer membrane protein, TolC family.
 
 0.779
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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