STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msil_3575PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: mma:MM_2976 type I restriction-modification system restriction subunit. (976 aa)    
Predicted Functional Partners:
Msil_1550
PFAM: N-6 DNA methylase; KEGG: lpc:LPC_2790 putative type I restriction enzyme HindVIIP M protein.
 
 
 0.938
Msil_3570
PFAM: N-6 DNA methylase; KEGG: mma:MM_2981 type I restriction-modification system specificity subunit.
 
 
 0.938
Msil_3571
KEGG: mca:MCA0277 hypothetical protein.
 
  
 0.913
Msil_1551
KEGG: rde:RD1_4054 type I restriction-mod.
 
  
 0.912
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.