Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Msil_3790PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: mex:Mext_0565 ABC transporter related. (912 aa)    
Predicted Functional Partners:
Msil_3791
PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_0564 secretion protein HlyD family protein.
 
  
 0.955
Msil_1398
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_3463 binding-protein-dependent transport systems inner membrane component.
  
 
 0.896
Msil_1397
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bid:Bind_3464 binding-protein-dependent transport systems inner membrane component.
  
 
 0.892
Msil_3789
PFAM: ABC-2 type transporter; KEGG: bid:Bind_1742 ABC-2 type transporter.
 
  
0.889
Msil_2951
PFAM: secretion protein HlyD family protein; KEGG: bid:Bind_0809 secretion protein HlyD family protein.
 
  
 0.811
Msil_2723
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: bid:Bind_1113 beta-ketoacyl synthase.
  
  
 0.610
Msil_2949
PFAM: ABC-2 type transporter; KEGG: bid:Bind_0811 ABC-2 type transporter.
 
  
0.535
cysN
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.534
Msil_0009
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bid:Bind_0009 ABC transporter related.
  
  
 0.507
Msil_2407
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cak:Caul_4410 ABC transporter related.
  
  
 0.507
Your Current Organism:
Methylocella silvestris
NCBI taxonomy Id: 395965
Other names: M. silvestris BL2, Methylocella silvestris BL2, Methylocella silvestris str. BL2, Methylocella silvestris strain BL2, Methylocella sp. BL2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.