STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
regBSensor histidine kinase RegB; Protein involved in signal transducer activity and signal transduction. (436 aa)    
Predicted Functional Partners:
actR
Acid tolerance response regulator ActR; Protein involved in two-component response regulator activity, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
 
 0.994
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.963
ANL59009.1
Sensor histidine kinase/response regulator hybrid protein; Protein involved in signal transducer activity, signal transduction and regulation of transcription, DNA-dependent.
  
 
 0.925
ANL58101.1
Sensor histidine kinase protein; Protein involved in signal transducer activity, protein histidine kinase activity, signal transduction and peptidyl-histidine phosphorylation.
 
 
 
 0.807
ANL58050.1
Hypothetical protein.
  
     0.739
hrpB
ATP-dependent RNA helicase HrpB; Protein involved in nucleic acid binding, ATP binding and ATP-dependent helicase activity.
   
 
 0.733
ANL61552.1
Protein involved in two-component response regulator activity, DNA binding, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
  
 
 0.718
ANL57513.1
Ornithine cyclodeaminase protein; Protein involved in nucleotide binding.
       0.708
ANL61526.1
Hypothetical protein.
  
     0.703
pleD
Response regulator PleD; Protein involved in two-component response regulator activity, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
 
 
 0.698
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.