STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL57530.1TetR family transcriptional regulator protein; Protein involved in DNA binding. (225 aa)    
Predicted Functional Partners:
ANL57528.1
Hypothetical protein.
 
     0.748
ANL57527.1
Xylose isomerase domain-containing protein.
 
     0.722
ANL57529.1
Protein involved in nucleotide binding.
 
     0.674
ANL57531.1
Sugar ABC transporter substrate-binding protein.
 
     0.557
ANL57534.1
Protein involved in nucleotide binding, metabolic process and oxidation-reduction process.
 
     0.534
ANL57532.1
Sugar ABC transporter permease protein; Protein involved in transporter activity and transport.
       0.482
ANL57533.1
Sugar ABC transporter permease protein; Protein involved in transporter activity and transport.
       0.442
ANL57725.1
Protein involved in N-acetyltransferase activity.
  
     0.432
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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